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CPLC Seminar: Andy Belmont "Combining cytology, live-cell imaging, and genomics to study nuclear and chromosome organization"

1/18/2019 3:48:15 PM CPLC Staff

We have used a combination of light and electron microscopy, including live-cell imaging, together with engineering tagged chromosome regions, to provide insights into chromosome and nuclear organization in eukaryotic cells. Most recently we have developed a novel genomic method to predict the location of chromosomes, genome-wide, relative to different nuclear compartments. I will describe several examples from this work addressing how DNA replication and transcription may occur on a highly condensed chromosome template, demonstrating long-range directional movements of chromosomes over several microns at velocities of ~ 1 micron/min towards specific nuclear compartments, and demonstrating the subsequent transcriptional amplification of certain genes when they are brought into contact with certain nuclear compartments- specifically nuclear speckles. Genome-wide analysis reveals that these nuclear speckles act as a hub for roughly half of the gene-dense transcriptional "hot-zones" in human chromosomes. More generally, comparing different cell lines suggests a tight correlation between small shifts in nuclear position with changes in gene expression, the logic of which remains unclear. Together our work suggests that both large-scale chromatin compaction and the active positioning of chromosome regions within the nucleus act to modulate levels of transcription.

3/16/2014

Urbana-Chicago Fest, March 15, 2014

http://icmt.illinois.edu/workshops/urbana-chicagofest2014/

The Institute for Condensed Matter Theory hosted a joint symposium on condensed matter theory involving participants from the University of Chicago, Argonne National Lab, and two campuses of the University of Illinois, Chicago and Urbana-Champaign. This gathering brought together graduate students, postdoctoral researchers, visitors and faculty from these institutions in a relaxed atmosphere for talks and informal discussions on exciting topics at the frontiers of condensed matter theory and related areas.