CPLC Publications

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2017

  1. Y. Sun, G. Tortarolo, K.W. Teng, Y. Ishitsuka, U.C. Coskun, S.J. Liao, A. Diaspro, G. Vicidomini, P.R. Selvin, B. Barbieri. A novel pulsed STED microscopy method using FastFLIM and the phasor plots. Proc. SPIE 10069, Multiphoton Microscopy in the Biomedical Sciences XVII, 100691C; DOI:10.1117/12.2267880. <2017)
  2. S.H. Lee, C. Jin, E. Cai, P. Ge, Y. Ishitsuka, K.W. Teng, A.A. de Thomaz, D.L. Nall, M. Baday, O. Jeyifous, D. Demonte, C.M. Dundas, S. Park, W.N. Green, P.R. Selvin. Super-resolution Imaging of Synaptic and Extra-synaptic Pools of AMPA Receptors with Different- sized Fluorescent Probes. eLife 2017;6:e27744 DOI: 10.7554/eLife.27744 (2017)
  3. J.A. Cole, Z. Luthey-Schulten. A Careful Accounting of Extrinsic Noise in Protein Expression Reveals Correlations Among its Sources. Physical Review E, 95(6):062418. doi: 10.1103/PhysRevE.95.062418 (2017)
  4. Z. Ghaemi, I. Guzman, D. Gnutt, Z. Luthey-Schulten, M. Gruebele. Role of Electrostatics in Protein-RNA binding: The Global vs. the Local Energy Landscape. Journal of Physical Chemistry B, doi: 10.1021/acs.jpcb.7b04318 (2017)
  5. J.R. Peterson, J.A. Cole, Z. Luthey-Schulten. Parametric Studies of Metabolic Cooperativity in Escherichia coli Colonies: Strain and Geometric Confinement Effects. PLoS ONE, 12(8):e0182570. doi: 10.1371/journal.pone.0182570 (2017)
  6. P. Labhsetwar, M.C.R. Melo, J.A. Cole, Z. Luthey-Schulten. Population FBA Predicts Metabolic Phenotypes in Yeast. PLoS Computational Biology, 13(9):e1005728. doi: 10.1371/journal.pcbi.1005728 (2017)
  7. S.C. Abeysirigunawardena, H. Kim, J. Lai, K. Ragunathan, M.C. Rappe, Z. Luthey-Schulten, T. Ha, S.A. Woodson. Evolution of protein-coupled RNA dynamics during hierarchical assembly of ribosomal complexes. Nature Communications, 8(1):492, doi: 10.1038/s41467-017-00536-1 (2017)
  8. C. Maffeo and A. Aksimentiev. Molecular mechanism of DNA association with single-stranded DNA binding protein. Nucleic Acids Research 45: 1212512139 (2017)
  9. D.T. Fraebel, H. Mickalide, D. Schnitkey, J. Merritt, T.E. Kuhlman, S. Kuehn. Environment determines evolutionary trajectory in a constrained phenotypic space. eLife 6:e24669. DOI: 10.7554/eLife.24669 (2017).
  10. V.C. Luca, B.C. Kim, C. Ge, S. Kakuda, D. Wu, M. Roein-Peikar, R.S. Haltiwanger, C. Zhu, T. Ha, K.C. Garcia. Notch-Jagged complex structure implicates a catch bond in tuning ligand sensitivity. Science 355(6331), 1320–1324. DOI: 10.1126/science.aaf9739 (2017).
  11. I.T.S. Li, T. Ha, Y.R. Chemla. Mapping cell surface adhesion by rotation tracking and adhesion footprinting. Sci. Rep. 7:44502. DOI: 10.1038/srep44502 (2017).
  12. J.A. Englaender, J.A. Jones, B.F. Cress, T.E. Kuhlman, R.J. Linhardt, M.A.G. Koffas. Effect of genomic integration location on heterologous protein expression and metabolic engineering in E. coli. ACS Synth. Biol. 6(4), 710–720. DOI: 10.1021/acssynbio.6b00350 (2017).